Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | APR52_38740 | Not Available | Positive | 8406641 - 8407426 | 28811.8 |
| hypothetical protein | APR52_38745 | Not Available | Negative | 8407550 - 8407939 | 14103.0 |
| hypothetical protein | APR52_38750 | Not Available | Negative | 8408545 - 8410416 | 67050.2 |
| hypothetical protein | APR52_38755 | Not Available | Negative | 8411337 - 8411651 | 11554.6 |
| fumarylacetoacetate hydrolase | APR52_38760 | D4GP28 | Negative | 8412423 - 8413634 | 42829.1 |
| galactonate dehydratase | APR52_38765 | Not Available | Negative | 8413703 - 8415271 | 55052.4 |
| nipsnap family containing protein | APR52_38770 | Not Available | Negative | 8415282 - 8415614 | 12822.2 |
| amino acid abc transporter | APR52_38775 | O34563 | Negative | 8415611 - 8416396 | 28264.6 |
| phosphate abc transporter atp-binding protein | APR52_38780 | P27675 | Negative | 8416450 - 8417187 | 26482.2 |
| amino acid abc transporter permease | APR52_38785 | Not Available | Negative | 8417191 - 8417859 | 23973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
