Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38685 | Not Available | Negative | 8393636 - 8394847 | 43446.8 |
| hypothetical protein | APR52_38690 | Not Available | Negative | 8394873 - 8396411 | 56169.9 |
| disulfide bond formation protein dsba | APR52_38695 | Not Available | Negative | 8396558 - 8397253 | 25233.8 |
| 4-hydroxyphenylpyruvate dioxygenase | APR52_38705 | Q88JU3 | Negative | 8398783 - 8400660 | 67799.6 |
| 3-oxoadipate enol-lactonase | APR52_38710 | Not Available | Negative | 8400852 - 8401616 | 27207.5 |
| mfs transporter | APR52_38715 | Not Available | Negative | 8401613 - 8402812 | 42095.3 |
| carboxymuconolactone decarboxylase | APR52_38720 | Not Available | Negative | 8402839 - 8403264 | 15615.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | APR52_38725 | Q9I6Q8 | Negative | 8403300 - 8404499 | 42000.9 |
| shikimate dehydrogenase | APR52_38730 | Q1AWA3 | Negative | 8404667 - 8405500 | 29321.4 |
| shikimate dehydrogenase | APR52_38735 | A5G270 | Negative | 8405527 - 8406441 | 32273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
