Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | APR52_03180 | Not Available | Positive | 686861 - 688027 | 40513.5 |
| dna-binding protein | APR52_03185 | Not Available | Positive | 688024 - 688422 | 14583.4 |
| abc transporter atp-binding protein | APR52_03190 | Not Available | Negative | 688459 - 689253 | 29340.8 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_03195 | Not Available | Negative | 689282 - 690532 | 45692.9 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_03200 | Not Available | Negative | 690595 - 691839 | 45411.6 |
| branched-chain amino acid abc transporter permease | APR52_03205 | Not Available | Negative | 691887 - 692960 | 38740.7 |
| branched-chain amino acid abc transporter permease | APR52_03210 | Not Available | Negative | 692966 - 693853 | 31107.4 |
| amp-binding protein | APR52_03215 | Q7TYX8 | Negative | 693856 - 695730 | 68957.8 |
| abc transporter atp-binding protein | APR52_03220 | Not Available | Negative | 695819 - 696610 | 28991.6 |
| 2-nitropropane dioxygenase | APR52_03225 | Not Available | Negative | 697030 - 698013 | 34374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
