Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR52_38635 | Q9C757 | Positive | 8382120 - 8383589 | 52841.2 |
| glycerol kinase | APR52_38640 | Q5P212 | Positive | 8383589 - 8385145 | 54811.4 |
| fad-dependent oxidoreductase | APR52_38645 | P64185 | Positive | 8385142 - 8386821 | 61711.1 |
| fad-linked oxidase | APR52_38650 | Q8X7S0 | Positive | 8386818 - 8388368 | 55340.1 |
| transcriptional regulator | APR52_38655 | Q46906 | Positive | 8388379 - 8388975 | 20947.3 |
| hypothetical protein | APR52_38660 | Not Available | Negative | 8388972 - 8389904 | 33998.3 |
| phospholipase | APR52_38665 | Not Available | Negative | 8390083 - 8390751 | 24045.1 |
| 2-nitropropane dioxygenase | APR52_38670 | Q9HWH9 | Negative | 8390782 - 8391843 | 36242.5 |
| hypothetical protein | APR52_38675 | Not Available | Positive | 8392067 - 8392990 | 32734.3 |
| hypothetical protein | APR52_38680 | Not Available | Positive | 8393006 - 8393632 | 23302.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
