Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38585 | Q3SJH5 | Positive | 8369983 - 8371275 | 49296.3 |
| spovr family protein | APR52_38590 | P29013 | Positive | 8371272 - 8372846 | 61116.2 |
| 3-dehydroquinate dehydratase | APR52_38595 | C5CU07 | Negative | 8372854 - 8373294 | 15725.1 |
| lysr family transcriptional regulator | APR52_38600 | Not Available | Negative | 8373334 - 8374305 | 35349.6 |
| (2fe-2s)-binding protein | APR52_38605 | H9N291 | Positive | 8374445 - 8375128 | 23743.3 |
| (2fe-2s)-binding protein | APR52_38610 | F0E1K6 | Positive | 8375139 - 8376002 | 31989.0 |
| glutathione s-transferase | APR52_38615 | Not Available | Positive | 8375999 - 8376649 | 23885.7 |
| glycine dehydrogenase | APR52_38620 | C5CRW8 | Positive | 8376698 - 8379604 | 103932.0 |
| hypothetical protein | APR52_38625 | Not Available | Positive | 8379610 - 8380341 | 26619.1 |
| hypothetical protein | APR52_38630 | Not Available | Negative | 8380284 - 8381849 | 54850.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
