Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR52_38535 | P51831 | Positive | 8358307 - 8359068 | 26547.8 |
| abc transporter substrate-binding protein | APR52_38540 | Not Available | Positive | 8359099 - 8360079 | 34541.6 |
| mfs transporter | APR52_38545 | Not Available | Positive | 8360088 - 8361077 | 34107.4 |
| phosphatidylserine decarboxylase | APR52_38550 | C5CU16 | Positive | 8361216 - 8362067 | 31299.7 |
| transcriptional regulator | APR52_38555 | Not Available | Positive | 8362263 - 8362715 | 15543.5 |
| peptidylprolyl isomerase | APR52_38560 | P0A0W2 | Positive | 8362840 - 8363190 | 12234.3 |
| molecular chaperone grpe | APR52_38565 | Q128K3 | Positive | 8363431 - 8363994 | 19904.2 |
| molecular chaperone dnak | APR52_38570 | C5CU12 | Positive | 8364118 - 8366061 | 69346.5 |
| molecular chaperone dnaj | APR52_38575 | A1VMG1 | Positive | 8366184 - 8367323 | 40865.3 |
| serine/threonine protein kinase | APR52_38580 | P0ACY5 | Positive | 8368000 - 8369922 | 73385.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
