Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | APR52_38485 | P42399 | Positive | 8347603 - 8348226 | 23053.2 |
| phosphate abc transporter atp-binding protein | APR52_38490 | Not Available | Positive | 8348246 - 8349025 | 27895.1 |
| amino acid abc transporter | APR52_38495 | P0AEN0 | Positive | 8349083 - 8349877 | 28659.7 |
| nad-dependent dehydratase | APR52_38500 | Q888H1 | Positive | 8349891 - 8350703 | 29646.1 |
| gluconolactonase | APR52_38505 | P0DOV6 | Positive | 8350718 - 8351608 | 31624.4 |
| c4-dicarboxylate abc transporter | APR52_38510 | Q128M1 | Positive | 8351673 - 8352650 | 36018.6 |
| c4-dicarboxylate abc transporter permease | APR52_38515 | Not Available | Positive | 8352788 - 8353276 | 18006.5 |
| hypothetical protein | APR52_38520 | Not Available | Positive | 8353286 - 8354581 | 45448.5 |
| galactarate dehydratase | APR52_38525 | Not Available | Positive | 8354581 - 8356140 | 55598.9 |
| hypothetical protein | APR52_38530 | Not Available | Positive | 8356226 - 8358247 | 73386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
