Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine protease | APR52_38385 | Not Available | Negative | 8322420 - 8323232 | 30124.0 |
| hypothetical protein | APR52_38390 | Not Available | Negative | 8326182 - 8326409 | 8719.5 |
| hypothetical protein | APR52_38395 | Not Available | Negative | 8326641 - 8326832 | 7242.88 |
| hypothetical protein | APR52_38400 | Q46036 | Negative | 8327172 - 8327759 | 22064.6 |
| gdsl family lipase | APR52_38405 | Not Available | Negative | 8330100 - 8330777 | 24195.3 |
| hypothetical protein | APR52_38410 | Q4UNB1 | Negative | 8330835 - 8331731 | 31237.9 |
| hypothetical protein | APR52_38415 | Not Available | Negative | 8331832 - 8333511 | 59740.2 |
| transcriptional regulator | APR52_38420 | P45099 | Positive | 8333678 - 8334586 | 33627.5 |
| phosphohydrolase | APR52_38425 | Not Available | Positive | 8334718 - 8335320 | 22091.2 |
| lactate permease | APR52_38430 | Q46839 | Positive | 8335371 - 8336972 | 56645.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
