Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38335 | Not Available | Positive | 8315528 - 8316205 | 24902.5 |
| hypothetical protein | APR52_38340 | Not Available | Positive | 8316400 - 8316645 | 9289.91 |
| hypothetical protein | APR52_38345 | Not Available | Negative | 8317807 - 8318049 | 8894.83 |
| hypothetical protein | APR52_38350 | Not Available | Positive | 8318117 - 8318332 | 7808.62 |
| hypothetical protein | APR52_38355 | Not Available | Positive | 8318773 - 8319006 | 8604.47 |
| hypothetical protein | APR52_38360 | Q4ZSY3 | Positive | 8319007 - 8319222 | 7924.51 |
| hypothetical protein | APR52_38365 | Not Available | Positive | 8319387 - 8319659 | 10038.2 |
| marr family transcriptional regulator | APR52_38370 | Not Available | Positive | 8319951 - 8320403 | 16454.7 |
| hydrolase | APR52_38375 | P94573 | Positive | 8320417 - 8320971 | 19424.4 |
| mfs transporter | APR52_38380 | Not Available | Positive | 8320968 - 8322212 | 44354.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
