Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38280 | Not Available | Negative | 8302063 - 8303463 | 50601.2 |
| caspase | APR52_38290 | Not Available | Positive | 8304650 - 8305717 | 38477.4 |
| cytochrome b | APR52_38295 | Not Available | Positive | 8305714 - 8306259 | 20077.6 |
| hydrolase | APR52_38300 | Not Available | Negative | 8306322 - 8307344 | 35141.6 |
| mfs transporter | APR52_38305 | P46105 | Negative | 8307685 - 8309121 | 49326.8 |
| hypothetical protein | APR52_38310 | Not Available | Negative | 8309145 - 8309618 | 17861.4 |
| tetr family transcriptional regulator | APR52_38315 | P75952 | Positive | 8309939 - 8310568 | 22910.4 |
| hypothetical protein | APR52_38320 | Q2RSB4 | Positive | 8310693 - 8311127 | 14699.8 |
| hypothetical protein | APR52_38325 | Not Available | Negative | 8311164 - 8313233 | 71832.6 |
| hypothetical protein | APR52_38330 | Not Available | Negative | 8313329 - 8315062 | 60486.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
