Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38230 | Not Available | Positive | 8290446 - 8290895 | 15394.1 |
| hypothetical protein | APR52_38235 | Not Available | Positive | 8291178 - 8291630 | 15493.7 |
| transporter | APR52_38240 | Not Available | Positive | 8291767 - 8293131 | 49926.6 |
| secretion protein hlyd | APR52_38245 | Q9ZHD0 | Positive | 8293128 - 8294849 | 59938.0 |
| cation transporter | APR52_38250 | P38054 | Positive | 8294846 - 8298007 | 115544.0 |
| hypothetical protein | APR52_38255 | Not Available | Positive | 8298225 - 8298536 | 11093.6 |
| transposase | APR52_38260 | Not Available | Positive | 8298533 - 8298871 | 12293.0 |
| transposase | APR52_38265 | Not Available | Positive | 8298957 - 8300672 | 64168.3 |
| hypothetical protein | APR52_38270 | Not Available | Positive | 8300669 - 8301172 | 18701.1 |
| hypothetical protein | APR52_38275 | Not Available | Positive | 8301628 - 8301921 | 10424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
