Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38180 | Not Available | Negative | 8275381 - 8275668 | 10175.4 |
| hypothetical protein | APR52_38185 | Not Available | Negative | 8275836 - 8276327 | 17190.6 |
| copper oxidase | APR52_38190 | Q339K6 | Negative | 8276370 - 8277785 | 51851.4 |
| transporter | APR52_38195 | Not Available | Negative | 8277808 - 8279229 | 51043.6 |
| hypothetical protein | APR52_38200 | Not Available | Negative | 8279720 - 8280151 | 15372.6 |
| two-component system response regulator | APR52_38205 | Not Available | Positive | 8280797 - 8281480 | 25480.9 |
| histidine kinase | APR52_38210 | Q44007 | Positive | 8281582 - 8282883 | 47540.0 |
| type ii restriction endonuclease | APR52_38215 | Not Available | Positive | 8283068 - 8284330 | 46180.2 |
| copper resistance protein copb | APR52_38220 | Not Available | Negative | 8286296 - 8287096 | 29660.1 |
| copper resistance protein copa | APR52_38225 | P59571 | Negative | 8287645 - 8289444 | 67107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
