Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR52_38125 | Not Available | Positive | 8262449 - 8263522 | 38849.1 |
| metallophosphatase | APR52_38130 | Q93GX3 | Positive | 8263519 - 8264379 | 30971.9 |
| hypothetical protein | APR52_38135 | Q8X5Z7 | Positive | 8264473 - 8266134 | 59717.7 |
| hypothetical protein | APR52_38145 | Not Available | Positive | 8267137 - 8267637 | 18572.2 |
| copper-transporting atpase | APR52_38150 | Q9X5V3 | Negative | 8267999 - 8270314 | 81263.1 |
| copper-binding protein | APR52_38155 | Not Available | Negative | 8270552 - 8270743 | 6624.94 |
| copper oxidase | APR52_38160 | P12374 | Negative | 8270848 - 8272824 | 72409.2 |
| cytochrome c | APR52_38165 | Not Available | Negative | 8273316 - 8273975 | 23016.8 |
| hypothetical protein | APR52_38170 | Not Available | Negative | 8274037 - 8274438 | 14578.7 |
| hypothetical protein | APR52_38175 | Not Available | Negative | 8274479 - 8275330 | 32032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
