Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal | APR52_38075 | Not Available | Positive | 8251032 - 8252411 | 48837.8 |
| enoyl-coa hydratase | APR52_38080 | Q3MIE0 | Positive | 8252429 - 8253214 | 27348.3 |
| restriction endonuclease | APR52_38085 | Not Available | Negative | 8253219 - 8253779 | 21023.2 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | APR52_38090 | P0AG42 | Positive | 8253948 - 8255060 | 39874.8 |
| isoleucine--trna ligase | APR52_38095 | Q2T0H3 | Positive | 8255183 - 8258035 | 106047.0 |
| signal peptidase ii | APR52_38100 | Q125P4 | Positive | 8258035 - 8258547 | 18794.9 |
| laci family transcriptional regulator | APR52_38105 | P0ACN9 | Positive | 8258700 - 8259719 | 35760.2 |
| abc transporter substrate-binding protein | APR52_38110 | Not Available | Positive | 8259771 - 8260784 | 36302.6 |
| abc transporter permease | APR52_38115 | P41032 | Positive | 8260821 - 8261651 | 29457.5 |
| abc transporter permease | APR52_38120 | Q08382 | Positive | 8261659 - 8262459 | 28973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
