Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase | APR52_38025 | Q9KSS4 | Positive | 8240910 - 8241869 | 34388.0 |
| 50s ribosomal protein l33 | APR52_38030 | A1TSP8 | Positive | 8242350 - 8242523 | 6547.1 |
| aminotransferase | APR52_38035 | Not Available | Negative | 8242666 - 8243880 | 46068.7 |
| sam-dependent methyltransferase | APR52_38040 | P72943 | Negative | 8244014 - 8245285 | 46542.9 |
| peptidase m48 | APR52_38045 | Not Available | Negative | 8245314 - 8247167 | 70306.0 |
| hypothetical protein | APR52_38050 | Not Available | Positive | 8247238 - 8247477 | 8977.69 |
| peptidase inhibitor i78 | APR52_38055 | Not Available | Negative | 8247493 - 8247807 | 10373.5 |
| phosphoribosylglycinamide formyltransferase | APR52_38060 | P08179 | Negative | 8247845 - 8248441 | 20855.2 |
| pimeloyl-coa dehydrogenase large subunit | APR52_38065 | Not Available | Positive | 8248628 - 8249809 | 43732.4 |
| acyl-coa dehydrogenase | APR52_38070 | Not Available | Positive | 8249822 - 8250937 | 40046.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
