Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-6-deoxy-delta-3,4-glucoseen reductase | APR52_37975 | Q66DP5 | Positive | 8229189 - 8230253 | 38807.5 |
| abc transporter substrate-binding protein | APR52_37980 | Not Available | Positive | 8230378 - 8231310 | 32266.9 |
| abc transporter atp-binding protein | APR52_37985 | Not Available | Negative | 8231395 - 8232171 | 27261.5 |
| abc transporter atp-binding protein | APR52_37990 | Not Available | Negative | 8232173 - 8232949 | 28196.2 |
| abc transporter atp-binding protein | APR52_37995 | Not Available | Negative | 8232967 - 8234175 | 42683.3 |
| abc transporter permease | APR52_38000 | Not Available | Negative | 8234189 - 8235118 | 32306.1 |
| recombination factor protein rara | APR52_38005 | P39918 | Negative | 8235360 - 8236652 | 47436.8 |
| outer membrane lipoprotein carrier protein lola | APR52_38010 | Q21TL7 | Negative | 8236681 - 8237319 | 22780.1 |
| cell division protein ftsk | APR52_38015 | Q8XWX9 | Negative | 8237475 - 8239910 | 88293.2 |
| hypothetical protein | APR52_38020 | P9WMH2 | Negative | 8240047 - 8240721 | 24982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
