Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_37925 | Not Available | Positive | 8220383 - 8221360 | 33562.1 |
| hypothetical protein | APR52_37930 | Not Available | Negative | 8221361 - 8222023 | 24056.8 |
| hypothetical protein | APR52_37935 | Not Available | Negative | 8222020 - 8222826 | 29348.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | APR52_37940 | Q5C9L6 | Negative | 8222837 - 8223880 | 40469.9 |
| lysr family transcriptional regulator | APR52_37945 | Not Available | Positive | 8224063 - 8225088 | 37203.6 |
| taurine abc transporter permease | APR52_37950 | Not Available | Negative | 8225006 - 8225887 | 32247.5 |
| nitrate abc transporter atp-binding protein | APR52_37955 | Q471U2 | Negative | 8225880 - 8226668 | 28639.7 |
| taurine abc transporter substrate-binding protein | APR52_37960 | Q47537 | Negative | 8226695 - 8227711 | 36164.5 |
| hypothetical protein | APR52_37965 | Not Available | Positive | 8227879 - 8228070 | 7649.17 |
| nad-dependent dehydratase | APR52_37970 | Not Available | Negative | 8228193 - 8229125 | 34516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
