Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobs | APR52_37775 | P29933 | Positive | 8188894 - 8189868 | 36132.5 |
| cobalt chelatase | APR52_37780 | P29934 | Positive | 8189881 - 8191608 | 64440.8 |
| iclr family transcriptional regulator | APR52_37785 | Not Available | Positive | 8191882 - 8192673 | 27995.7 |
| laci family transcriptional regulator | APR52_37790 | Not Available | Positive | 8192670 - 8193662 | 34604.9 |
| sulfoacetaldehyde dehydrogenase | APR52_37795 | Q0K845 | Positive | 8193680 - 8195128 | 50873.5 |
| long-chain fatty acid--coa ligase | APR52_37800 | Q0K844 | Positive | 8195131 - 8196648 | 53633.6 |
| hypothetical protein | APR52_37805 | Not Available | Positive | 8196645 - 8197439 | 27402.8 |
| hypothetical protein | APR52_37810 | Not Available | Negative | 8197402 - 8198640 | 45373.4 |
| acyl-coa dehydrogenase | APR52_37815 | B2AM55 | Negative | 8198723 - 8199970 | 44085.3 |
| hypothetical protein | APR52_37820 | Not Available | Positive | 8200143 - 8201138 | 36094.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
