Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase | APR52_37720 | Not Available | Positive | 8177210 - 8177575 | 13860.6 |
| fumarate reductase | APR52_37725 | Q68XN9 | Positive | 8177592 - 8179400 | 65968.6 |
| succinate dehydrogenase | APR52_37730 | P07014 | Positive | 8179448 - 8180149 | 26654.4 |
| hypothetical protein | APR52_37735 | Q8XXX1 | Positive | 8180165 - 8180533 | 13305.9 |
| type ii citrate synthase | APR52_37740 | P94325 | Positive | 8180546 - 8181856 | 48653.8 |
| lysr family transcriptional regulator | APR52_37745 | Q57748 | Positive | 8182032 - 8182991 | 34300.3 |
| isopropylmalate isomerase | APR52_37750 | C5CSH5 | Positive | 8183035 - 8184456 | 50729.7 |
| 3-isopropylmalate dehydratase | APR52_37755 | C5CSH4 | Positive | 8184472 - 8185128 | 24593.4 |
| 3-isopropylmalate dehydrogenase | APR52_37760 | Q21XI1 | Positive | 8185165 - 8186265 | 39402.4 |
| aspartate-semialdehyde dehydrogenase | APR52_37765 | P41399 | Positive | 8186359 - 8187501 | 40571.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
