Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_37670 | Not Available | Positive | 8166145 - 8166600 | 15460.2 |
| hypothetical protein | APR52_37675 | Not Available | Positive | 8167344 - 8168480 | 43086.8 |
| hypothetical protein | APR52_37680 | Not Available | Positive | 8168492 - 8169355 | 31971.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | APR52_37685 | Q9I2V5 | Negative | 8169452 - 8172037 | 92399.1 |
| hypothetical protein | APR52_37690 | Not Available | Negative | 8172151 - 8172726 | 20402.7 |
| aldolase | APR52_37695 | Not Available | Negative | 8172759 - 8173772 | 35631.6 |
| trans-aconitate methyltransferase | APR52_37700 | C5CSI6 | Negative | 8173769 - 8174551 | 29085.8 |
| malate dehydrogenase | APR52_37705 | A1TP96 | Negative | 8174565 - 8175551 | 34957.1 |
| gntr family transcriptional regulator | APR52_37710 | Q8X835 | Positive | 8175760 - 8176521 | 28402.3 |
| succinate dehydrogenase | APR52_37715 | Not Available | Positive | 8176750 - 8177196 | 16595.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
