Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | APR52_03065 | P23102 | Positive | 664230 - 665039 | 28627.1 |
| hypothetical protein | APR52_03070 | Not Available | Negative | 665055 - 665435 | 13696.6 |
| thiolase | APR52_03080 | Not Available | Positive | 667119 - 668324 | 41456.5 |
| hypothetical protein | APR52_03085 | O27449 | Positive | 668330 - 668776 | 16065.2 |
| hypothetical protein | APR52_03090 | Not Available | Negative | 668925 - 669527 | 21831.5 |
| iclr family transcriptional regulator | APR52_03100 | Not Available | Positive | 671078 - 671872 | 28070.8 |
| abc transporter substrate-binding protein | APR52_03110 | O31404 | Positive | 672739 - 673665 | 31150.2 |
| pyruvate dehydrogenase | APR52_03115 | Q0J0H4 | Positive | 673662 - 674675 | 34963.3 |
| enoyl-coa hydratase | APR52_03120 | Not Available | Positive | 674684 - 675463 | 27991.2 |
| hypothetical protein | APR52_03125 | Q4ULG1 | Positive | 675468 - 676697 | 42100.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
