Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | APR52_37610 | Not Available | Negative | 8147439 - 8147921 | 17734.0 |
| two-component system response regulator | APR52_37615 | Not Available | Negative | 8148013 - 8148738 | 27403.2 |
| xre family transcriptional regulator | APR52_37625 | Not Available | Positive | 8149692 - 8150535 | 30221.3 |
| acyl-coa dehydrogenase | APR52_37630 | Q47146 | Negative | 8150423 - 8152708 | 81412.7 |
| hypothetical protein | APR52_37635 | Not Available | Negative | 8152847 - 8153479 | 21859.2 |
| hypothetical protein | APR52_37640 | Not Available | Negative | 8153506 - 8154636 | 42401.0 |
| hypothetical protein | APR52_37645 | Not Available | Negative | 8154633 - 8155778 | 42508.8 |
| hemagglutinin | APR52_37650 | Q8ZL64 | Negative | 8155863 - 8157290 | 45467.0 |
| hypothetical protein | APR52_37660 | Not Available | Positive | 8164870 - 8165550 | 22698.8 |
| hypothetical protein | APR52_37665 | Not Available | Positive | 8165569 - 8166072 | 16477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
