Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR52_37560 | Not Available | Positive | 8136149 - 8138044 | 70089.2 |
| abc transporter | APR52_37565 | D5ARH0 | Positive | 8138087 - 8138830 | 27084.2 |
| abc transporter permease | APR52_37570 | Not Available | Positive | 8138823 - 8139416 | 21130.5 |
| hypothetical protein | APR52_37575 | Not Available | Negative | 8139417 - 8139908 | 18389.6 |
| helicase snf2 | APR52_37580 | Not Available | Positive | 8140194 - 8140574 | 12288.2 |
| hypothetical protein | APR52_37585 | Not Available | Positive | 8141114 - 8141719 | 22432.1 |
| vanw family protein | APR52_37590 | Not Available | Positive | 8141692 - 8143548 | 67536.9 |
| hypothetical protein | APR52_37595 | Not Available | Positive | 8143545 - 8145218 | 60244.0 |
| alkane 1-monooxygenase | APR52_37600 | P0ADV6 | Positive | 8145263 - 8146255 | 35664.5 |
| trna-specific 2-thiouridylase | APR52_37605 | B9MIA2 | Positive | 8146320 - 8147432 | 40893.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
