Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR52_37510 | Not Available | Positive | 8125250 - 8125957 | 25692.2 |
| arac family transcriptional regulator | APR52_37515 | Not Available | Negative | 8125939 - 8126724 | 28785.9 |
| permease | APR52_37520 | Not Available | Positive | 8126741 - 8127664 | 32008.4 |
| glutathione s-transferase | APR52_37525 | Not Available | Positive | 8127759 - 8128487 | 26990.9 |
| hypothetical protein | APR52_37530 | Not Available | Negative | 8128489 - 8128989 | 18326.1 |
| hypothetical protein | APR52_37535 | Not Available | Positive | 8129085 - 8129978 | 32246.2 |
| rna 2'-phosphotransferase | APR52_37540 | Q02V26 | Positive | 8129975 - 8130526 | 19521.2 |
| hypothetical protein | APR52_37545 | Not Available | Negative | 8130528 - 8131085 | 21108.2 |
| pyruvate dehydrogenase | APR52_37550 | Q59097 | Negative | 8131148 - 8133817 | 97624.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | APR52_37555 | B2JP68 | Positive | 8134146 - 8135924 | 61906.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
