Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR52_37460 | Not Available | Positive | 8113367 - 8114395 | 36677.7 |
| hypothetical protein | APR52_37465 | Not Available | Positive | 8114400 - 8114936 | 19845.3 |
| cytochrome c | APR52_37470 | Not Available | Negative | 8115038 - 8115700 | 22029.2 |
| multidrug transporter | APR52_37475 | Not Available | Negative | 8115840 - 8117399 | 54823.7 |
| acriflavine resistance protein b | APR52_37480 | P24181 | Negative | 8117353 - 8120520 | 112993.0 |
| rnd transporter | APR52_37485 | P0AE07 | Negative | 8120539 - 8121828 | 44170.9 |
| tetr family transcriptional regulator | APR52_37490 | Q8G2M8 | Positive | 8122007 - 8122678 | 24295.2 |
| Trna-arg | Not Available | Not Available | Positive | 8122721 - 8122795 | Not Available |
| hypothetical protein | APR52_37500 | Not Available | Negative | 8122875 - 8123396 | 18623.4 |
| histidine kinase | APR52_37505 | P30847 | Positive | 8123803 - 8125188 | 50392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
