Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | APR52_37410 | Not Available | Negative | 8104237 - 8105496 | 43930.5 |
| tetr family transcriptional regulator | APR52_37415 | Not Available | Positive | 8105739 - 8106323 | 20814.0 |
| hypothetical protein | APR52_37420 | Not Available | Negative | 8106346 - 8106540 | 6546.34 |
| lysr family transcriptional regulator | APR52_37425 | Not Available | Negative | 8106630 - 8107487 | 30126.8 |
| 2,2-dialkylglycine decarboxylase | APR52_37430 | P16932 | Positive | 8107583 - 8108905 | 47252.9 |
| iron transporter | APR52_37435 | Not Available | Positive | 8109156 - 8110469 | 46004.8 |
| hypothetical protein | APR52_37440 | Not Available | Negative | 8110492 - 8111306 | 27922.2 |
| hypothetical protein | APR52_37445 | Not Available | Negative | 8111322 - 8111915 | 21976.1 |
| hypothetical protein | APR52_37450 | Not Available | Positive | 8111969 - 8112754 | 27858.0 |
| ketosteroid isomerase | APR52_37455 | Not Available | Positive | 8112825 - 8113277 | 16159.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
