Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c peroxidase | APR52_37355 | Not Available | Negative | 8084052 - 8087165 | 111083.0 |
| rnd transporter | APR52_37360 | Not Available | Negative | 8087167 - 8088294 | 39150.1 |
| hypothetical protein | APR52_37365 | Not Available | Negative | 8088375 - 8088863 | 17250.7 |
| hypothetical protein | APR52_37370 | Not Available | Negative | 8088860 - 8089141 | 10456.7 |
| hypothetical protein | APR52_37375 | Not Available | Positive | 8090414 - 8091247 | 30896.1 |
| hypothetical protein | APR52_37385 | Not Available | Positive | 8094252 - 8094446 | 7311.31 |
| hypothetical protein | APR52_37390 | Not Available | Positive | 8098247 - 8098441 | 7331.0 |
| integrase | APR52_37395 | Not Available | Negative | 8098817 - 8100037 | 45724.7 |
| hypothetical protein | APR52_37400 | Not Available | Negative | 8100359 - 8102245 | 67407.2 |
| carboxypeptidase | APR52_37405 | Not Available | Positive | 8102810 - 8104075 | 45112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
