Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein | APR52_37200 | Not Available | Negative | 8055262 - 8055762 | 18347.6 |
| hypothetical protein | APR52_37205 | Not Available | Negative | 8055948 - 8056151 | 7285.48 |
| arac family transcriptional regulator | APR52_37210 | Not Available | Negative | 8056213 - 8057145 | 33984.6 |
| gluconokinase | APR52_37215 | P12011 | Negative | 8057262 - 8058821 | 55965.2 |
| permease dsdx | APR52_37220 | Q9ZIJ1 | Negative | 8058835 - 8060187 | 47599.4 |
| laci family transcriptional regulator | APR52_37225 | Q9I1F6 | Positive | 8060374 - 8061411 | 36959.3 |
| phosphatidylethanolamine-binding protein | APR52_37230 | Not Available | Negative | 8061427 - 8061972 | 18302.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | APR52_37235 | Not Available | Negative | 8061977 - 8062768 | 28135.7 |
| arac family transcriptional regulator | APR52_37240 | Not Available | Positive | 8062926 - 8063810 | 33555.1 |
| nad synthetase | APR52_37245 | Q9RJM5 | Negative | 8063812 - 8064657 | 29911.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
