Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_03015 | Not Available | Positive | 654637 - 655863 | 41225.2 |
| hypothetical protein | APR52_03020 | O33453 | Positive | 655850 - 656527 | 25001.1 |
| aminocarboxymuconate-semialdehyde decarboxylase | APR52_03025 | Q54LN9 | Positive | 656517 - 657539 | 37227.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR52_03030 | O85987 | Positive | 657596 - 658618 | 35482.8 |
| hypothetical protein | APR52_03035 | Q51978 | Positive | 658633 - 659001 | 12898.1 |
| anthranilate 1,2-dioxygenase | APR52_03040 | Q84BZ2 | Positive | 659017 - 659505 | 18612.3 |
| rieske (2fe-2s) protein | APR52_03045 | Q84BZ3 | Positive | 659525 - 660796 | 47253.1 |
| benzoate 1,2-dioxygenase large subunit | APR52_03050 | Not Available | Positive | 660831 - 662165 | 49848.9 |
| hypothetical protein | APR52_03055 | P23100 | Positive | 662162 - 662662 | 18972.3 |
| 4-hydroxybenzoate transporter | APR52_03060 | Q9I6Q3 | Positive | 662854 - 664188 | 46854.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
