Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | APR52_37045 | Not Available | Negative | 8019039 - 8019551 | 18284.1 |
| transposase | APR52_37050 | Not Available | Negative | 8019572 - 8020081 | 19023.0 |
| chromosome partitioning protein parb | APR52_37055 | Not Available | Negative | 8020159 - 8020422 | 9666.73 |
| atpase | APR52_37060 | Not Available | Negative | 8020419 - 8021060 | 22713.6 |
| repa replication protein | APR52_37065 | Not Available | Negative | 8021353 - 8022234 | 33076.7 |
| transcriptional regulator | APR52_37070 | Not Available | Negative | 8022255 - 8022587 | 12109.2 |
| hypothetical protein | APR52_37075 | Not Available | Negative | 8022688 - 8023491 | 29319.7 |
| hypothetical protein | APR52_37080 | Not Available | Negative | 8023719 - 8024066 | 12856.2 |
| xre family transcriptional regulator | APR52_37085 | Not Available | Positive | 8024304 - 8024591 | 10509.8 |
| hypothetical protein | APR52_37090 | Not Available | Negative | 8024638 - 8024925 | 10616.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
