Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | APR52_36995 | Q53193 | Negative | 8004115 - 8005074 | 34960.5 |
| peptide abc transporter permease | APR52_37000 | Not Available | Negative | 8005071 - 8005967 | 31967.7 |
| abc transporter permease | APR52_37005 | Not Available | Negative | 8005964 - 8006938 | 35379.9 |
| hypothetical protein | APR52_37010 | Not Available | Negative | 8006942 - 8008516 | 57393.9 |
| hypothetical protein | APR52_37015 | Not Available | Negative | 8008562 - 8009146 | 21568.6 |
| hypothetical protein | APR52_37020 | Q58373 | Negative | 8010094 - 8011740 | 59271.5 |
| hypothetical protein | APR52_37025 | Q58374 | Negative | 8011745 - 8013793 | 72595.0 |
| glyoxylate/hydroxypyruvate reductase a | APR52_37030 | Not Available | Negative | 8013914 - 8014852 | 34514.9 |
| d-amino acid oxidase | APR52_37035 | Q9AGP3 | Negative | 8014945 - 8016273 | 47509.0 |
| type vi secretion protein | APR52_37040 | Not Available | Negative | 8016752 - 8018710 | 72091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
