Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_36945 | Not Available | Negative | 7990371 - 7990709 | 12537.9 |
| hypothetical protein | APR52_36950 | Not Available | Negative | 7990795 - 7990974 | 6693.9 |
| alanine dehydrogenase | APR52_36955 | E1V931 | Negative | 7991615 - 7992733 | 39066.2 |
| succinate-semialdehyde dehydrogenase | APR52_36960 | P25526 | Negative | 7992844 - 7994310 | 52240.2 |
| hypothetical protein | APR52_36965 | E1V7V7 | Negative | 7994391 - 7995797 | 50956.1 |
| 2,5-didehydrogluconate reductase | APR52_36970 | A0QL30 | Negative | 7995806 - 7996654 | 30869.8 |
| hypothetical protein | APR52_36975 | Not Available | Negative | 7996651 - 7998081 | 50398.2 |
| hydantoin utilization protein b | APR52_36980 | Not Available | Negative | 7998109 - 8000124 | 72512.4 |
| hydantoinase | APR52_36985 | Not Available | Negative | 8000121 - 8002211 | 75083.6 |
| hypothetical protein | APR52_36990 | Not Available | Negative | 8002379 - 8002840 | 17378.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
