Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | APR52_36880 | D3KVM6 | Negative | 7973771 - 7974328 | 20085.0 |
| abc transporter substrate-binding protein | APR52_36885 | Not Available | Positive | 7974534 - 7975499 | 34249.3 |
| methyltryptophan oxidase | APR52_36890 | Not Available | Positive | 7975513 - 7976727 | 43660.8 |
| 2-dehydropantoate 2-reductase | APR52_36895 | O31717 | Positive | 7976793 - 7977731 | 32509.1 |
| hydroxylase | APR52_36900 | Q4KCZ0 | Negative | 7977887 - 7979245 | 51115.9 |
| lysr family transcriptional regulator | APR52_36910 | P77559 | Negative | 7981230 - 7982117 | 33007.1 |
| homoserine kinase | APR52_36920 | A1VMB2 | Negative | 7983664 - 7984629 | 35865.8 |
| threonine synthase | APR52_36925 | Not Available | Negative | 7984647 - 7986065 | 52038.2 |
| nad-dependent epimerase | APR52_36930 | Q6GJB5 | Negative | 7986065 - 7987027 | 35414.1 |
| 2-amino-3-ketobutyrate coa ligase | APR52_36935 | P37419 | Negative | 7987024 - 7988226 | 43324.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
