Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease | APR52_36830 | P74547 | Negative | 7964603 - 7965496 | 32321.1 |
| sulfate transporter | APR52_36835 | Not Available | Negative | 7965498 - 7966385 | 31293.1 |
| thiosulfate transporter subunit | APR52_36840 | Q9I3L9 | Negative | 7966386 - 7967402 | 36279.0 |
| alpha/beta hydrolase | APR52_36845 | Not Available | Negative | 7967399 - 7967974 | 20588.4 |
| peroxidase | APR52_36850 | Q54SE2 | Negative | 7968009 - 7968650 | 23572.8 |
| lysr family transcriptional regulator | APR52_36855 | Not Available | Negative | 7968778 - 7969692 | 33338.5 |
| fmn-dependent nadh-azoreductase | APR52_36860 | Q220J4 | Positive | 7969828 - 7970475 | 22484.6 |
| hypothetical protein | APR52_36865 | Not Available | Positive | 7970665 - 7972017 | 47371.0 |
| hypothetical protein | APR52_36870 | Not Available | Positive | 7972014 - 7972751 | 26339.6 |
| hypothetical protein | APR52_36875 | Not Available | Positive | 7972774 - 7973748 | 34954.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
