Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | APR52_36780 | Q8XXC4 | Negative | 7953265 - 7954566 | 46510.7 |
| hypothetical protein | APR52_36785 | A1TS27 | Negative | 7954624 - 7955349 | 26049.7 |
| hypothetical protein | APR52_36790 | O30478 | Positive | 7955594 - 7956634 | 37401.1 |
| acyltransferase | APR52_36795 | Not Available | Positive | 7956668 - 7957468 | 29444.6 |
| glycosyl transferase family 2 | APR52_36800 | Not Available | Positive | 7957435 - 7958211 | 28866.0 |
| rnd transporter | APR52_36805 | P45217 | Negative | 7958216 - 7959601 | 48884.2 |
| macrolide transporter | APR52_36810 | Q3JGG7 | Negative | 7959594 - 7961579 | 71450.7 |
| hemolysin secretion protein d | APR52_36815 | P64176 | Negative | 7961576 - 7962742 | 42152.8 |
| disulfide bond formation protein b | APR52_36820 | Q21WM5 | Negative | 7962976 - 7963491 | 18775.7 |
| sulfate abc transporter atp-binding protein | APR52_36825 | Q7WGW1 | Negative | 7963488 - 7964588 | 40451.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
