Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | APR52_36730 | Not Available | Negative | 7944282 - 7944929 | 22781.7 |
| 3-ketoacyl-acp reductase | APR52_36735 | Q92RN6 | Positive | 7945127 - 7945909 | 26952.3 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_36740 | Not Available | Positive | 7945953 - 7946885 | 34042.0 |
| hypothetical protein | APR52_36745 | Q44470 | Positive | 7946977 - 7948311 | 46975.4 |
| ribonuclease | APR52_36750 | P0A9J2 | Negative | 7948324 - 7949850 | 56296.9 |
| septum formation inhibitor maf | APR52_36755 | Q12C38 | Negative | 7949867 - 7950478 | 21702.4 |
| 50s rrna methyltransferase | APR52_36760 | C5CLQ6 | Negative | 7950551 - 7951018 | 17295.9 |
| iojap family protein | APR52_36765 | Q7P0P8 | Negative | 7951015 - 7951716 | 24657.8 |
| nicotinate-nucleotide adenylyltransferase | APR52_36770 | Q21WQ0 | Negative | 7951716 - 7952342 | 22647.2 |
| hypothetical protein | APR52_36775 | C5CLQ3 | Negative | 7952339 - 7953265 | 34226.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
