Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_36680 | Not Available | Negative | 7934410 - 7934727 | 11214.3 |
| hypothetical protein | APR52_36685 | Not Available | Negative | 7934720 - 7935058 | 12591.1 |
| hypothetical protein | APR52_36690 | Not Available | Negative | 7935051 - 7935431 | 13143.5 |
| integrase | APR52_36695 | P08320 | Negative | 7937228 - 7938439 | 44897.6 |
| Trna-lys | Not Available | Not Available | Positive | 7938617 - 7938692 | Not Available |
| heme biosynthesis protein hemy | APR52_36705 | Q46927 | Negative | 7938779 - 7939648 | 30314.1 |
| tol-pal system protein | APR52_36710 | Not Available | Negative | 7939677 - 7940435 | 28176.1 |
| peptidoglycan-binding protein | APR52_36715 | Q9I4Z4 | Negative | 7940435 - 7940959 | 18725.1 |
| translocation protein tolb | APR52_36720 | Q21WN7 | Negative | 7940984 - 7942234 | 44431.1 |
| lipid transporter atp-binding/permease | APR52_36725 | Q12C33 | Positive | 7942510 - 7944300 | 64933.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
