Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | APR52_36630 | C5CPN2 | Negative | 7923503 - 7924459 | 34590.4 |
| lipocalin | APR52_36635 | Not Available | Positive | 7924723 - 7925394 | 24414.1 |
| haloacid dehalogenase | APR52_36640 | Not Available | Negative | 7925340 - 7926002 | 24407.5 |
| sugar abc transporter substrate-binding protein | APR52_36645 | Q8U6M1 | Negative | 7926026 - 7927072 | 37015.6 |
| iron abc transporter permease | APR52_36650 | Not Available | Negative | 7927069 - 7929354 | 80709.2 |
| iron abc transporter substrate-binding protein | APR52_36655 | Not Available | Negative | 7929355 - 7930368 | 36443.7 |
| glucose-6-phosphate dehydrogenase | APR52_36660 | Q9Z3S2 | Positive | 7930521 - 7931990 | 54928.3 |
| extradiol dioxygenase | APR52_36665 | P24197 | Negative | 7931992 - 7932930 | 32698.1 |
| hypothetical protein | APR52_36670 | A0A0H2ZH52 | Negative | 7933022 - 7933237 | 7660.3 |
| hypothetical protein | APR52_36675 | Not Available | Negative | 7933326 - 7934129 | 30037.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
