Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_02965 | Not Available | Positive | 645889 - 646440 | 19385.3 |
| hypothetical protein | APR52_02970 | Not Available | Positive | 646537 - 647736 | 43033.0 |
| hypothetical protein | APR52_02975 | P21627 | Positive | 647789 - 648649 | 29698.9 |
| hypothetical protein | APR52_02980 | Not Available | Positive | 648646 - 649644 | 35024.2 |
| hypothetical protein | APR52_02985 | Not Available | Positive | 649641 - 650402 | 27822.3 |
| abc transporter atp-binding protein | APR52_02990 | Not Available | Positive | 650395 - 651093 | 24897.4 |
| p-cumate dioxygenase | APR52_02995 | Q51974 | Positive | 651146 - 652417 | 47448.1 |
| aromatic-ring-hydroxylating dioxygenase | APR52_03000 | Q51975 | Positive | 652432 - 652920 | 18756.1 |
| hypothetical protein | APR52_03005 | Not Available | Positive | 652932 - 653840 | 33370.3 |
| 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase | APR52_03010 | A5W4G5 | Positive | 653837 - 654640 | 27686.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
