Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | APR52_36530 | Q79CE8 | Positive | 7899300 - 7900829 | 58264.2 |
| molecular chaperone groes | APR52_36535 | C5CPP9 | Positive | 7901071 - 7901361 | 10323.5 |
| molecular chaperone groel | APR52_36540 | C5CPP8 | Positive | 7901391 - 7903043 | 57450.5 |
| asnc family transcriptional regulator | APR52_36545 | P0ACJ7 | Negative | 7903146 - 7903664 | 19059.8 |
| pyruvate ferredoxin oxidoreductase | APR52_36550 | O27880 | Positive | 7903756 - 7907418 | 132068.0 |
| xylulose kinase | APR52_36555 | P09099 | Negative | 7907433 - 7908890 | 51050.2 |
| arac family transcriptional regulator | APR52_36560 | Not Available | Negative | 7908927 - 7909880 | 35980.8 |
| ribokinase | APR52_36565 | P42720 | Negative | 7909928 - 7910878 | 33195.5 |
| transaldolase | APR52_36570 | B8JAM9 | Negative | 7910902 - 7911573 | 23749.7 |
| sorbitol dehydrogenase | APR52_36575 | Q59787 | Negative | 7911687 - 7912475 | 27526.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
