Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase | APR52_36420 | Not Available | Positive | 7871014 - 7872111 | 39296.6 |
| luxr family transcriptional regulator | APR52_36425 | Not Available | Negative | 7872122 - 7872907 | 28250.1 |
| fad-dependent oxidoreductase | APR52_36430 | Not Available | Positive | 7872996 - 7874786 | 63682.0 |
| hypothetical protein | APR52_36435 | Not Available | Positive | 7874783 - 7875004 | 7740.22 |
| abc transporter substrate-binding protein | APR52_36440 | Not Available | Positive | 7875024 - 7875998 | 34390.7 |
| dioxygenase | APR52_36450 | Not Available | Negative | 7877220 - 7877633 | 15397.3 |
| polysaccharide biosynthesis protein gumn | APR52_36455 | Not Available | Positive | 7877835 - 7879031 | 41464.8 |
| hypothetical protein | APR52_36460 | Not Available | Positive | 7879043 - 7879414 | 12799.0 |
| tonb-dependent receptor | APR52_36465 | Not Available | Positive | 7879532 - 7881829 | 82888.1 |
| hypothetical protein | APR52_36470 | Not Available | Positive | 7881874 - 7882776 | 30714.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
