Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl family lipase | APR52_36365 | Not Available | Positive | 7854905 - 7856248 | 46065.6 |
| hypothetical protein | APR52_36370 | Not Available | Positive | 7856392 - 7856769 | 14162.7 |
| formyltetrahydrofolate deformylase | APR52_36375 | Q46339 | Negative | 7856847 - 7857701 | 31354.5 |
| omega amino acid--pyruvate aminotransferase | APR52_36380 | Not Available | Positive | 7857834 - 7859168 | 48479.3 |
| hypothetical protein | APR52_36385 | Not Available | Positive | 7859517 - 7860017 | 16301.6 |
| hypothetical protein | APR52_36395 | Not Available | Positive | 7861799 - 7867177 | 169228.0 |
| hypothetical protein | APR52_36400 | Not Available | Negative | 7867271 - 7868122 | 30067.1 |
| hypothetical protein | APR52_36405 | Not Available | Positive | 7868194 - 7869249 | 36839.2 |
| hypothetical protein | APR52_36410 | Not Available | Negative | 7869304 - 7869582 | 10467.2 |
| hypothetical protein | APR52_36415 | Not Available | Negative | 7869700 - 7870881 | 40888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
