Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_36315 | Not Available | Positive | 7840892 - 7842376 | 52953.2 |
| hypothetical protein | APR52_36320 | Not Available | Positive | 7842424 - 7842621 | 7156.7 |
| gntr family transcriptional regulator | APR52_36325 | Not Available | Negative | 7842668 - 7843360 | 25384.7 |
| hypothetical protein | APR52_36330 | A1TSY0 | Positive | 7843674 - 7844411 | 25596.4 |
| allophanate hydrolase | APR52_36335 | Not Available | Positive | 7844411 - 7846015 | 55548.6 |
| acetyl/propionyl-coa carboxylase subuit alpha | APR52_36340 | P96890 | Positive | 7846012 - 7847739 | 60540.5 |
| amino acid abc transporter substrate-binding protein | APR52_36345 | Q2YL86 | Negative | 7847744 - 7849003 | 44956.0 |
| tetr family transcriptional regulator | APR52_36350 | Not Available | Negative | 7849027 - 7849698 | 25094.8 |
| amp-dependent synthetase | APR52_36355 | P94547 | Positive | 7849877 - 7851523 | 59351.5 |
| carbamoyl-phosphate synthase large subunit | APR52_36360 | Q06862 | Positive | 7851534 - 7854833 | 116002.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
