Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase | APR52_36215 | C5CJ75 | Negative | 7810481 - 7811980 | 53475.1 |
| glucose-1-phosphate adenylyltransferase | APR52_36220 | Q141E6 | Negative | 7811989 - 7813317 | 48672.3 |
| glycogen debranching protein | APR52_36225 | A6TF50 | Negative | 7813415 - 7815541 | 76948.4 |
| glycogen branching protein | APR52_36230 | A8GKV0 | Negative | 7816176 - 7818347 | 81038.2 |
| alpha-glucosidase | APR52_36235 | Q9Z3R8 | Negative | 7818352 - 7820013 | 61196.1 |
| fad-dependent oxidoreductase | APR52_36240 | Not Available | Positive | 7820108 - 7821616 | 53952.1 |
| leucine--trna ligase | APR52_36245 | C5CJ85 | Positive | 7821705 - 7824335 | 97143.6 |
| hypothetical protein | APR52_36250 | Not Available | Positive | 7824347 - 7824865 | 18607.8 |
| dna polymerase iii subunit delta | APR52_36255 | Not Available | Positive | 7824881 - 7825957 | 38792.8 |
| gamma-glutamyl phosphate reductase | APR52_36260 | A1VTR9 | Positive | 7826006 - 7827298 | 45330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
