Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | APR52_36165 | P0A5A4 | Positive | 7800162 - 7802294 | 78040.1 |
| ribosome hibernation promoting factor | APR52_36170 | P28613 | Positive | 7802642 - 7802971 | 12729.3 |
| pts sugar transporter subunit iia | APR52_36175 | Q9HVV4 | Positive | 7803181 - 7803648 | 16358.9 |
| serine kinase | APR52_36180 | C5CJ68 | Positive | 7803748 - 7804707 | 35527.3 |
| fur family transcriptional regulator | APR52_36185 | O30330 | Negative | 7804709 - 7805128 | 15817.0 |
| cell envelope protein smpa | APR52_36190 | B1XT70 | Positive | 7805217 - 7805780 | 20761.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | APR52_36195 | Q46XD7 | Positive | 7805878 - 7806723 | 29325.2 |
| flagellar motor protein mota | APR52_36200 | B0RLE6 | Positive | 7806752 - 7807453 | 24237.6 |
| biopolymer transporter exbd | APR52_36205 | Not Available | Positive | 7807465 - 7807932 | 16118.4 |
| maltodextrin phosphorylase | APR52_36210 | P0AC86 | Negative | 7807951 - 7810434 | 93036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
