Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | APR52_36110 | Not Available | Negative | 7788470 - 7789660 | 44063.4 |
| hypothetical protein | APR52_36115 | Not Available | Negative | 7789698 - 7790219 | 19433.9 |
| long-chain fatty acid--coa ligase | APR52_36125 | Q8XDR6 | Positive | 7790753 - 7792432 | 60491.3 |
| peptide abc transporter permease | APR52_36130 | Not Available | Positive | 7792483 - 7793487 | 36613.0 |
| peptide transporter | APR52_36135 | Not Available | Positive | 7793492 - 7794400 | 31588.5 |
| peptide abc transporter atp-binding protein | APR52_36140 | P0AAG1 | Positive | 7794418 - 7795455 | 37389.0 |
| peptide abc transporter atp-binding protein | APR52_36145 | Not Available | Positive | 7795470 - 7796489 | 37388.7 |
| peptide abc transporter substrate-binding protein | APR52_36150 | Not Available | Positive | 7796534 - 7798165 | 60895.9 |
| s-adenosylhomocysteine nucleosidase | APR52_36155 | B5Y1L0 | Positive | 7798205 - 7798951 | 26020.4 |
| magnesium transporter cora | APR52_36160 | P0ABI6 | Negative | 7798944 - 7799930 | 37834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
