Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal | APR52_02915 | Not Available | Positive | 637548 - 638546 | 34575.3 |
| oxidoreductase | APR52_02920 | Not Available | Positive | 638563 - 639357 | 27810.1 |
| acetaldehyde dehydrogenase (acetylating) | APR52_02925 | Q52039 | Positive | 639377 - 640321 | 32977.2 |
| 4-hydroxy-2-oxovalerate aldolase | APR52_02930 | A1K6Y4 | Positive | 640362 - 641405 | 37141.4 |
| 4-oxalocrotonate decarboxylase | APR52_02935 | Not Available | Positive | 641418 - 642206 | 27203.1 |
| 4-oxalocrotonate tautomerase | APR52_02940 | Not Available | Positive | 642242 - 642433 | 7073.5 |
| (2fe-2s)-binding protein | APR52_02945 | Q53122 | Positive | 642527 - 643714 | 44592.2 |
| hypothetical protein | APR52_02950 | Not Available | Positive | 643717 - 644199 | 17924.4 |
| hypothetical protein | APR52_02955 | P70786 | Positive | 644387 - 645643 | 44249.8 |
| hypothetical protein | APR52_02960 | Not Available | Negative | 645664 - 645900 | 8812.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
