Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | APR52_35960 | A0A1I9LN01 | Negative | 7755300 - 7756961 | 60362.6 |
| peptide abc transporter atp-binding protein | APR52_35965 | P42065 | Negative | 7757011 - 7758045 | 37550.7 |
| peptide abc transporter atp-binding protein | APR52_35970 | Not Available | Negative | 7758042 - 7759073 | 37316.0 |
| abc transporter permease | APR52_35975 | Not Available | Negative | 7759075 - 7759995 | 32310.1 |
| abc transporter permease | APR52_35980 | Q8FWN8 | Negative | 7760024 - 7760998 | 34766.7 |
| peptide abc transporter substrate-binding protein | APR52_35985 | Q8FUX2 | Negative | 7761011 - 7762612 | 58301.4 |
| fad-dependent oxidoreductase | APR52_35990 | Not Available | Negative | 7762822 - 7764270 | 53179.4 |
| polyketide cyclase | APR52_35995 | Not Available | Negative | 7764279 - 7764680 | 14371.7 |
| gntr family transcriptional regulator | APR52_36000 | Not Available | Positive | 7764830 - 7766368 | 56937.2 |
| atp-dependent rna helicase | APR52_36005 | Not Available | Negative | 7766441 - 7767913 | 53692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
