Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | APR52_35910 | C3KDW8 | Positive | 7746810 - 7748105 | 46250.1 |
| ubiquinone biosynthesis protein ubie | APR52_35915 | Not Available | Positive | 7748102 - 7748749 | 23299.2 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR52_35920 | Q9KR64 | Positive | 7748873 - 7749874 | 36638.1 |
| hypothetical protein | APR52_35925 | P43932 | Positive | 7749959 - 7750729 | 27357.2 |
| carbonate dehydratase | APR52_35930 | Q32K62 | Positive | 7750803 - 7751363 | 19876.6 |
| hypothetical protein | APR52_35935 | Not Available | Positive | 7751779 - 7752153 | 13339.9 |
| hypothetical protein | APR52_35940 | Not Available | Positive | 7752137 - 7752343 | 6938.33 |
| hypothetical protein | APR52_35945 | Not Available | Positive | 7752401 - 7753786 | 51403.9 |
| gnat family acetyltransferase | APR52_35950 | Not Available | Negative | 7753791 - 7754252 | 17788.0 |
| cobalamin biosynthesis protein p47k | APR52_35955 | Q9HZQ2 | Negative | 7754323 - 7755303 | 33794.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
