Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | APR52_35805 | Not Available | Negative | 7724738 - 7725580 | 30160.6 |
| alkylhydroperoxidase | APR52_35810 | P96684 | Positive | 7726044 - 7726496 | 16501.8 |
| rna polymerase subunit sigma-24 | APR52_35815 | Not Available | Negative | 7726513 - 7727424 | 34598.6 |
| hypothetical protein | APR52_35820 | Not Available | Negative | 7728244 - 7728483 | 9098.9 |
| relaxase | APR52_35825 | Not Available | Positive | 7729304 - 7730410 | 41393.3 |
| hypothetical protein | APR52_35830 | Not Available | Negative | 7730513 - 7731259 | 28226.8 |
| hypothetical protein | APR52_35840 | Not Available | Negative | 7733048 - 7733254 | 7557.12 |
| glyoxalase | APR52_35845 | Not Available | Positive | 7733307 - 7733885 | 21961.8 |
| mbl fold metallo-hydrolase | APR52_35850 | Not Available | Positive | 7733908 - 7734870 | 34996.4 |
| 2-keto-4-pentenoate hydratase | APR52_35855 | Not Available | Positive | 7734886 - 7735875 | 35846.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
